Barley Genomic Resources

  • Genome browsers with high quality assemblies and annotations of nearly 100 barley accessions.
  • Pan-genome present/absent variation explorer (Panache) of 76 barley accessions.
  • Pan-transcriptome data of 20 barley accessions.

Oat Genomic Resources

  • Genome browsers with high quality assemblies and annotations of 24 Oat accessions.
  • Genetic variant data including SNPs and InDels from a world-wide Oat collection.
  • Pan-transcriptome data of 24 Oat accessions.

Barley Genome Browser

Genome browser including 76 Barley Accessions from the Barley pangenome project and over 20 key Australian Barley accessions based on JBrowse version 2. The genome browser includes various variant and annotation tracks.

Oat Genome Browser

Oat genome browser of 24 Oat Accessions from the Oat pangenome project using JBrowse version 2. Including various genetic variant tracks containing approximately from a collection of over 600 Oat accessions.

Barley Pan-Transcriptome

Pan-transcriptome data from 5 different tissues from 20 Barley accessions.

Oat Pan-Transcriptome

Pan transcriptome data of 6 different tissues from the Oat pangenome collection (24 accessions).

Barley Panache

Exploration of present/absent variation across the Barley pangenome. The database was built from the barley pangenome graph (generated from PGGB and imported into Panache using Morex v3 as the backbone). Gene and genomic coordinate lookup is avaiable, as well as sorting by phylogeny and PAV status.